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Query: LRRC40

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
LRRC40 0 -0.019 -0.150 0.300 -1.186 0.374 0.498

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
LRRC40 Ubiquitylation K356 -0.005 _EIISK(gl)GTQEVLK_

Background Information for LRRC40:





Protein-protein Interactions for LRRC40

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait AMTN Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C9orf3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CNPY3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GTF2E2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IQCF1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ISLR Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KERA Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LRIG1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LRRC27 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LRRC40 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LRRC57 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LUM Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SKP2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait USP47 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait VASN Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in LRRC40

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Leu-rich_rpt_typical-subtyp IPR003591 0.57
Category members Leu-rich_rpt IPR001611 0.32


Protein complexes (CORUM database) featuring LRRC40

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring LRRC40

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF


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