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Query: LRIF1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
LRIF1 1 4.666 -1.080 2.330

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
LRIF1 Phosphorylation S402 1.839 0.738 _DTLQTVSSS(ph)PVTEISR_
LRIF1 Ubiquitylation K11 -0.241 _VFLK(gl)PAEENSGNASR_
LRIF1 Ubiquitylation K279 -1.813 _NVATETQLK(gl)GGQHSQAAPVK_

Background Information for LRIF1:


Pubmed-LRIF1 »
Uniprot-LRIF1 »
Biogrid-LRIF1 »
ProteomicsDB-LRIF1 »

Tumorportal-LRIF1 »
COSMIC-LRIF1 »
GenomeRNAi-LRIF1 »
Genecards-LRIF1


Protein-protein Interactions for LRIF1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait LRIF1 Cat. description Hein, Mann, Cell 2015


Protein Domains in LRIF1
Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring LRIF1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring LRIF1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0016363 nuclear matrix Database 1.89
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0042974 retinoic acid receptor binding Database 0.02
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0


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