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Query: LONRF3

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
LONRF3 0 -1.529 0.510 -0.810

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
LONRF3 Ubiquitylation K536 -1.529 _FLPEELK(gl)ER_

Background Information for LONRF3:





Protein-protein Interactions for LONRF3

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait DMD Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait EIF2C3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RFPL4B Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in LONRF3

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members TPR-contain_dom IPR013026 0.97
Category members TPR_repeat IPR019734 0.93
Category members Znf_RING IPR001841 0
Category members Pept_S16_N IPR003111 0
Category members PUA-like_domain IPR015947 0
Category members Znf_C3HC4_RING-type IPR018957 0


Protein complexes (CORUM database) featuring LONRF3

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring LONRF3

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0004176 ATP-dependent peptidase activity Database 0
Category members GO Category GO:0006508 proteolysis Database 0
Category members GO Category GO:0046872 metal ion binding Database 0


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