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Query: LARP4B

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
LARP4B 0 2.398 -0.420 0.170 -0.691 -0.693 -0.045

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
LARP4B Phosphorylation S568 1.119 0.905 _TLS(ph)ADASVNTLPVVVSR_
LARP4B Phosphorylation T566 1.247 0.888 _T(ph)LSADASVNTLPVVVSR_
LARP4B Phosphorylation S498 0.849 0.718 _KNS(ph)FGYR_
LARP4B Ubiquitylation K225 0.173 _SLPLVQVDEK(gl)GEK_
LARP4B Ubiquitylation K311 -0.183 _AK(gl)AIAINTFLPK_
LARP4B Ubiquitylation K305 -0.039 -0.502 _TFQGKPIK(gl)AR_
LARP4B Phosphorylation S718 -1.617 -0.704 _RPAGGRPS(ph)PSAM(ox)GK_
LARP4B Phosphorylation S601 -1.223 -0.986 _SPS(ph)PAHLPDDPK_
LARP4B Phosphorylation S720 -1.248 _RPAGGRPSPS(ph)AM(ox)GK_
LARP4B Phosphorylation S599 -1.250 _S(ph)PSPAHLPDDPK_
LARP4B Phosphorylation T518 -2.042 _FTSSQTQSPT(ph)PPKPPSPS(ph)FELGLSSFPPLPGAAGNLK_
LARP4B Phosphorylation S526 -2.042 _FTSSQTQSPT(ph)PPKPPSPS(ph)FELGLSSFPPLPGAAGNLK_
LARP4B Phosphorylation S524 -2.145 -2.189 _FTSSQTQSPTPPKPPS(ph)PSFELGLSSFPPLPGAAGNLK_
LARP4B Phosphorylation S516 -2.115 _FTSSQTQS(ph)PT(ph)PPKPPSPSFELGLSSFPPLPGAAGNLK_
LARP4B Ubiquitylation K563 1.332 _LSSLIIGPSK(gl)ER_

Background Information for LARP4B:





Protein-protein Interactions for LARP4B

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CENPE Cat. description Hein, Mann, Cell 2015
Category members IP bait EIF3A Cat. description Hein, Mann, Cell 2015
Category members IP bait GSPT1;GSPT2 Cat. description Hein, Mann, Cell 2015
Category members IP bait HNRNPF Cat. description Hein, Mann, Cell 2015
Category members IP bait NPM1 Cat. description Hein, Mann, Cell 2015
Category members IP bait PABPC1 Cat. description Hein, Mann, Cell 2015
Category members IP bait RPL10 Cat. description Hein, Mann, Cell 2015
Category members IP bait RPL35 Cat. description Hein, Mann, Cell 2015
Category members IP bait STRAP Cat. description Hein, Mann, Cell 2015
Category members IP bait ASB3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FAM136A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FHL3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GNB2L1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IL13RA2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in LARP4B

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Lupus_La_RNA-bd IPR006630 0


Protein complexes (CORUM database) featuring LARP4B

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring LARP4B

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0010494 cytoplasmic stress granule Database 1.32
Category members GO Category GO:0042788 polysomal ribosome Database 0.28
Category members GO Category GO:0045727 positive regulation of translation Database 0


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