bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: IVNS1ABP

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
IVNS1ABP 0 -4.573 0.550 -0.850 -2.409 -0.845

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
IVNS1ABP Phosphorylation S338 -0.103 -0.117 _SLS(ph)FEMQQDELIEKPMSPMQYAR_
IVNS1ABP Phosphorylation S336 -0.371 -0.271 _S(ph)LSFEMQQDELIEKPMSPMQYAR_
IVNS1ABP Ubiquitylation K118 -0.375 _VK(gl)QVCGDYLLSR_
IVNS1ABP Ubiquitylation K103 -0.724 _ADKELVK(gl)DVYSAAK_

Background Information for IVNS1ABP:


Pubmed-IVNS1ABP »
Uniprot-IVNS1ABP »
Biogrid-IVNS1ABP »
ProteomicsDB-IVNS1ABP »

Tumorportal-IVNS1ABP »
COSMIC-IVNS1ABP »
GenomeRNAi-IVNS1ABP »
Genecards-IVNS1ABP


Protein-protein Interactions for IVNS1ABP
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ASNA1 Cat. description Hein, Mann, Cell 2015
Category members IP bait ATRX Cat. description Hein, Mann, Cell 2015
Category members IP bait ECD Cat. description Hein, Mann, Cell 2015
Category members IP bait EVPL Cat. description Hein, Mann, Cell 2015
Category members IP bait EXOSC4 Cat. description Hein, Mann, Cell 2015
Category members IP bait MLF1IP Cat. description Hein, Mann, Cell 2015
Category members IP bait NFYA Cat. description Hein, Mann, Cell 2015
Category members IP bait NIPSNAP1 Cat. description Hein, Mann, Cell 2015
Category members IP bait PTBP1 Cat. description Hein, Mann, Cell 2015
Category members IP bait TNPO1 Cat. description Hein, Mann, Cell 2015
Category members IP bait CCRN4L Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PRPSAP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PRPSAP2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in IVNS1ABP
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Kelch_1 IPR006652 0.44
Category members BTB/POZ-like IPR000210 0.43
Category members BACK IPR011705 0.43
Category members BTB/POZ_fold IPR011333 0.36
Category members BTB_POZ IPR013069 0.32
Category members Kelch-like_gigaxonin-typ IPR017096 0.23
Category members Kelch_2 IPR011498 0.2


Protein complexes (CORUM database) featuring IVNS1ABP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring IVNS1ABP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005654 nucleoplasm Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0008380 RNA splicing Database 10.77
Category members GO Category GO:0019048 modulation by virus of host morphology or physiology Database 7.81
Category members GO Category GO:0005681 spliceosomal complex Database 3.88
Category members GO Category GO:0005856 cytoskeleton Database 0.63
Category members GO Category GO:0043066 negative regulation of apoptotic process Database 0.6
Category members GO Category GO:0005667 transcription factor complex Database 0.19
Category members GO Category GO:0006383 transcription from RNA polymerase III promoter Database 0.18
Category members GO Category GO:0009615 response to virus Database 0


.

© Copyright Svejstrup Laboratory 2015