bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: IRF2BP2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
IRF2BP2 0 -2.733 -0.220 0.080 -1.584

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
IRF2BP2 Phosphorylation S240 -0.625 -0.224 _RPAS(ph)VSSSAAVEHEQR_
IRF2BP2 Phosphorylation S460 -0.998 -0.549 _NSNSPPS(ph)PSSM(ox)NQR_
IRF2BP2 Phosphorylation S318 -1.937 -0.705 _DTLLALHQHGHS(ph)GPFESK_
IRF2BP2 Phosphorylation S457 -1.445 -0.946 _NSNS(ph)PPSPSSMNQR_
IRF2BP2 Phosphorylation S360 -1.081 -1.030 _RKPS(ph)PEPEGEVGPPK_
IRF2BP2 Phosphorylation S175 -1.147 -1.192 _LEEPPELNRQS(ph)PNPR_
IRF2BP2 Phosphorylation S406 -1.195 -2.132 _IPMTPTSSFVSPPPPTAS(ph)PHSNR_
IRF2BP2 Ubiquitylation K303 -0.380 _GSGEQDWVNRPK(gl)TVR_
IRF2BP2 Phosphorylation S323 -1.271 _DTLLALHQHGHSGPFES(ph)K_
IRF2BP2 Phosphorylation T404 -1.868 _IPM(ox)TPTSSFVSPPPPT(ph)ASPHSNR_
IRF2BP2 Ubiquitylation K539 -0.671 _QSIK(gl)QQGASGEVYCPSGEK_

Background Information for IRF2BP2:


Pubmed-IRF2BP2 »
Uniprot-IRF2BP2 »
Biogrid-IRF2BP2 »
ProteomicsDB-IRF2BP2 »

Tumorportal-IRF2BP2 »
COSMIC-IRF2BP2 »
GenomeRNAi-IRF2BP2 »
Genecards-IRF2BP2


Protein-protein Interactions for IRF2BP2
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CCNL2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FOSL2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GCHFR Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IRF2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IRF2BP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LMO2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait UPRT Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait VGLL4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in IRF2BP2
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Interferon_reg_fac2-bd1_2_Znf IPR022750 0.13


Protein complexes (CORUM database) featuring IRF2BP2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring IRF2BP2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0046872 metal ion binding Database 0


.

© Copyright Svejstrup Laboratory 2015