bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: IPO8

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
IPO8 0 0.571 -0.100 -0.190 0.040 -0.069

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
IPO8 Ubiquitylation K504 0.496 0.104 _NAVELAKK(gl)_

Background Information for IPO8:





Protein-protein Interactions for IPO8

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait IPO8 Cat. description Hein, Mann, Cell 2015
Category members IP bait ZSCAN5A Cat. description Hein, Mann, Cell 2015
Category members IP bait AKR1C2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait BSG Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C19orf75 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GALNTL1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HP1BP3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PNKD Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PTGER3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait REPIN1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TNFSF13B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF331 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF354C Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZSCAN5A Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in IPO8

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members ARM-type_fold IPR016024 9.26
Category members Cse1 IPR013713 0.05
Category members Importin-beta_N IPR001494 0


Protein complexes (CORUM database) featuring IPO8

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring IPO8

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005488 binding Database 9.32
Category members GO Category GO:0006886 intracellular protein transport Database 2.48
Category members GO Category GO:0008536 Ran GTPase binding Database 0.21
Category members GO Category GO:0007165 signal transduction Database 0


© Copyright Svejstrup Laboratory 2015