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Query: HNRNPCL1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
HNRNPCL1 3 8.922 -2.010 4.500 -1.230 -0.447
HNRNPCL1 3 8.922 -2.010 4.500 -1.880

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
HNRNPCL1 Ubiquitylation K189 2.864 2.924 _LK(gl)GDDLQAIKK_
HNRNPCL1 Ubiquitylation K39 1.567 1.654 _KSDVEAIFSK(gl)YGK_
HNRNPCL1 Ubiquitylation K223 2.087 1.452 _EQSK(gl)QAVEMK_
HNRNPCL1 Ubiquitylation K8 0.732 1.200 _(ac)ASNVTNK(gl)TDPR_
HNRNPCL1 Ubiquitylation K204 1.166 1.091 _ELTQIK(gl)QK_
HNRNPCL1 Ubiquitylation K198 1.950 1.082 _K(gl)ELTQIK_
HNRNPCL1 Ubiquitylation K42 1.682 0.918 _YGK(gl)IVGCSVHK_
HNRNPCL1 Ubiquitylation K30 1.835 0.526 _K(gl)SDVEAIFSK_
HNRNPCL1 Ubiquitylation K29 0.547 0.408 _VFIGNLNTLVVK(gl)K_
HNRNPCL1 Ubiquitylation K89 2.190 _MIAGQVLDINLAAEPK(gl)VNR_
HNRNPCL1 Ubiquitylation K187 2.283 _SGK(gl)LKGDDLQAIK_
HNRNPCL1 Ubiquitylation K206 1.658 _QK(gl)VDSLLENLEK_
HNRNPCL1 Ubiquitylation K229 0.976 _QAVEMK(gl)NDKSEEEQSSSSVK_
HNRNPCL1 Ubiquitylation K232 1.213 _QAVEMK(gl)NDKSEEEQSSSSVK_
HNRNPCL1 Ubiquitylation K243 -0.143 _NDKSEEEQSSSSVK(gl)KDETNVK_
HNRNPCL1 Phosphorylation S253 0.514 _M(ox)ES(ph)EGGADDS(ph)AEEGGLLDDDDNEDRGDDQLELIK_
HNRNPCL1 Phosphorylation S260 0.514 _M(ox)ES(ph)EGGADDS(ph)AEEGGLLDDDDNEDRGDDQLELIK_

Background Information for HNRNPCL1:





Protein-protein Interactions for HNRNPCL1

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CDC26 Cat. description Hein, Mann, Cell 2015
Category members IP bait CEP135 Cat. description Hein, Mann, Cell 2015
Category members IP bait HNRNPD Cat. description Hein, Mann, Cell 2015
Category members IP bait TIPIN Cat. description Hein, Mann, Cell 2015
Category members IP bait BUB1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C11orf57 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ELAVL2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TFG Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZFC3H1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in HNRNPCL1

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members RRM_dom IPR000504 4.34
Category members hnRNP_C_Raly IPR017347 0.89


Protein complexes (CORUM database) featuring HNRNPCL1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring HNRNPCL1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members DDR Literature pubmedid:24332808 Marechal et al., 2014 RPA-mediated recruitment INF
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0030529 ribonucleoprotein complex Database 8.45
Category members GO Category GO:0000166 nucleotide binding Database 5.91
Category members GO Category GO:0003676 nucleic acid binding Database 0.83


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