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Query: HNRNPAB

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
HNRNPAB 1 2.662 0.020 -0.710 0.060 -0.548 -0.070

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
HNRNPAB Ubiquitylation K232 0.694 1.634 _VAQPK(gl)EVYQQQQYGSGGR_
HNRNPAB Ubiquitylation K83 0.990 1.367 _MFVGGLSWDTSK(gl)K_
HNRNPAB Ubiquitylation K84 0.745 1.367 _MFVGGLSWDTSKK(gl)DLK_
HNRNPAB Ubiquitylation K87 1.016 0.840 _DLK(gl)DYFTK_
HNRNPAB Ubiquitylation K131 0.599 0.601 _VLDQK(gl)EHR_
HNRNPAB Ubiquitylation K227 0.186 0.500 _CEIK(gl)VAQPK_
HNRNPAB Phosphorylation S242 -0.222 0.174 _EVYQQQQYGS(ph)GGR_
HNRNPAB Ubiquitylation K102 -0.071 0.021 _FGEVVDCTIK(gl)M(ox)DPNTGR_
HNRNPAB Ubiquitylation K126 0.333 _DAASVEK(gl)VLDQK_
HNRNPAB Ubiquitylation K169 -0.061 _IFVGGLNPEATEEK(gl)IR_
HNRNPAB Ubiquitylation K223 0.300 _FHTVSGSK(gl)CEIK_

Background Information for HNRNPAB:


Pubmed-HNRNPAB »
Uniprot-HNRNPAB »
Biogrid-HNRNPAB »
ProteomicsDB-HNRNPAB »

Tumorportal-HNRNPAB »
COSMIC-HNRNPAB »
GenomeRNAi-HNRNPAB »
Genecards-HNRNPAB


Protein-protein Interactions for HNRNPAB
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CENPF Cat. description Hein, Mann, Cell 2015
Category members IP bait EMC2 Cat. description Hein, Mann, Cell 2015
Category members IP bait HNRNPA1 Cat. description Hein, Mann, Cell 2015
Category members IP bait HNRNPA3 Cat. description Hein, Mann, Cell 2015
Category members IP bait HNRNPD Cat. description Hein, Mann, Cell 2015
Category members IP bait HNRNPU Cat. description Hein, Mann, Cell 2015
Category members IP bait PTTG1 Cat. description Hein, Mann, Cell 2015
Category members IP bait SGOL1 Cat. description Hein, Mann, Cell 2015
Category members IP bait SYNCRIP Cat. description Hein, Mann, Cell 2015


Protein Domains in HNRNPAB
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members RRM_dom IPR000504 4.34
Category members CARG-binding_factor_N IPR012956 0.21


Protein complexes (CORUM database) featuring HNRNPAB
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring HNRNPAB
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members DDR Literature pubmedid:TBD2_UV_increased Elia et al, 2015 UV increased acetylation events Elia et al. INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0030529 ribonucleoprotein complex Database 8.45
Category members GO Category GO:0000166 nucleotide binding Database 5.91
Category members GO Category GO:0003729 mRNA binding Database 1.38
Category members GO Category GO:0003676 nucleic acid binding Database 0.83
Category members GO Category GO:0003700 sequence-specific DNA binding transcription factor activity Database 0.63
Category members GO Category GO:0045893 positive regulation of transcription, DNA-dependent Database 0.28
Category members GO Category GO:0043565 sequence-specific DNA binding Database 0.18
Category members GO Category GO:0001837 epithelial to mesenchymal transition Database 0


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