bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: FDX1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
FDX1 0 1.559 -0.850 1.620

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
FDX1 Phosphorylation S63 -0.061 _SSS(ph)EDKITVHFINR_

Background Information for FDX1:





Protein-protein Interactions for FDX1

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CAPZA2 Cat. description Hein, Mann, Cell 2015
Category members IP bait CDC26 Cat. description Hein, Mann, Cell 2015
Category members IP bait GPATCH8 Cat. description Hein, Mann, Cell 2015
Category members IP bait HIF1A Cat. description Hein, Mann, Cell 2015
Category members IP bait LIMA1 Cat. description Hein, Mann, Cell 2015
Category members IP bait PRDX1 Cat. description Hein, Mann, Cell 2015


Protein Domains in FDX1

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members 2Fe-2S_ferredoxin-type IPR001041 0


Protein complexes (CORUM database) featuring FDX1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring FDX1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005739 mitochondrion Database 1.67
Category members GO Category GO:0005759 mitochondrial matrix Database 0.59
Category members GO Category GO:0044281 small molecule metabolic process Database 0.35
Category members GO Category GO:0006694 steroid biosynthetic process Database 0.29
Category members GO Category GO:0008203 cholesterol metabolic process Database 0.08
Category members GO Category GO:0005506 iron ion binding Database 0.04
Category members GO Category GO:0009055 electron carrier activity Database 0.02
Category members GO Category GO:0042446 hormone biosynthetic process Database 0
Category members GO Category GO:0051536 iron-sulfur cluster binding Database 0
Category members GO Category GO:0051537 2 iron, 2 sulfur cluster binding Database 0
Category members GO Category GO:0055114 oxidation-reduction process Database 0


© Copyright Svejstrup Laboratory 2015