bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: FBXO3

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
FBXO3 0 -0.966 0.410 -0.740

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
FBXO3 Ubiquitylation K218 -0.776 -0.190 _NK(gl)NEVFYQCPDQMAR_
FBXO3 Ubiquitylation K322 -0.876 _DALPEK(gl)ACQLDSR_

Background Information for FBXO3:





Protein-protein Interactions for FBXO3

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait IDS Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in FBXO3

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members SMI1/KNR4_like_dom IPR018958 0.22
Category members F-box_dom IPR001810 0
Category members ApaG_domain IPR007474 0


Protein complexes (CORUM database) featuring FBXO3

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring FBXO3

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members Pathway Pathway_621 REACTOME_ADAPTIVE_IMMUNE_SYSTEM 0 4.72
Category members Pathway Pathway_458 REACTOME_IMMUNE_SYSTEM 0 3
Category members Pathway Pathway_764 REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION 0 2.56
Category members Pathway Pathway_832 REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION 0 1.58
Category members GO Category GO:0004842 ubiquitin-protein ligase activity Database 0.24
Category members GO Category GO:0016567 protein ubiquitination Database 0.07
Category members GO Category GO:0006508 proteolysis Database 0


© Copyright Svejstrup Laboratory 2015