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Query: FARSB

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
FARSB 0 3.371 1.220 -0.700 0.211 0.445 0.230 0.372 0.503

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
FARSB Ubiquitylation K492 0.440 0.342 _DSNTDVGAK(gl)NYR_
FARSB Ubiquitylation K262 1.111 0.256 _NIFIECTGTDFTK(gl)AK_
FARSB Ubiquitylation K264 1.111 0.256 _NIFIECTGTDFTK(gl)AK_
FARSB Ubiquitylation K64 -0.344 -0.675 _AAGASDVVLYK(gl)IDVPANR_
FARSB Ubiquitylation K53 1.268 _EQGNVK(gl)AAGASDVVLYK_
FARSB Ubiquitylation K97 0.767 _IKAPVYK(gl)R_
FARSB Ubiquitylation K467 -1.006 _K(gl)MPLPLK_
FARSB Ubiquitylation K560 0.428 _GQSVGK(gl)LGVLHPDVITK_

Background Information for FARSB:


Pubmed-FARSB »
Uniprot-FARSB »
Biogrid-FARSB »
ProteomicsDB-FARSB »

Tumorportal-FARSB »
COSMIC-FARSB »
GenomeRNAi-FARSB »
Genecards-FARSB


Protein-protein Interactions for FARSB
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait APBA3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DTX3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FARSA Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FGB Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GPX7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GTF2E2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MAGEB10 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait USP47 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in FARSB
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members B3/B4_tRNA-bd IPR005146 0
Category members DNA-bd_dom_put IPR009061 0


Protein complexes (CORUM database) featuring FARSB
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring FARSB
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0006412 translation Database INF
Category members GO Category GO:0010467 gene expression Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0000166 nucleotide binding Database 5.91
Category members GO Category GO:0005524 ATP binding Database 5.54
Category members Pathway Pathway_201 REACTOME_CYTOSOLIC_TRNA_AMINOACYLATION 0 3.57
Category members Pathway Pathway_202 REACTOME_TRNA_AMINOACYLATION 0 1.34
Category members GO Category GO:0006418 tRNA aminoacylation for protein translation Database 0.91
Category members Pathway Pathway_409 KEGG_AMINOACYL_TRNA_BIOSYNTHESIS 0 0.82
Category members GO Category GO:0000287 magnesium ion binding Database 0
Category members GO Category GO:0004826 phenylalanine-tRNA ligase activity Database 0
Category members GO Category GO:0006432 phenylalanyl-tRNA aminoacylation Database 0


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