bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: EMB

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
EMB 0 -0.749 1.760 -0.660

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
EMB Ubiquitylation K157 -0.749 _GTFNFK(gl)VPELHGK_

Background Information for EMB:





Protein-protein Interactions for EMB

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait C20orf195 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait COMMD6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DHRS9 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DND1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GCAT Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LGALS12 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LGALS3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LGALS8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NYX Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait OS9 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC16A11 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SRPRB Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in EMB

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Ig-like_dom IPR007110 0.6
Category members Ig_sub IPR003599 0.43
Category members Ig_I-set IPR013098 0.13


Protein complexes (CORUM database) featuring EMB

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring EMB

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0007155 cell adhesion Database 0


© Copyright Svejstrup Laboratory 2015