bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: EBF3

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
EBF3 0 -0.280 0.450 -0.130

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
EBF3 Ubiquitylation K455 -0.280 _LQK(gl)VIPR_

Background Information for EBF3:





Protein-protein Interactions for EBF3

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CPNE2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CPNE4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CPNE7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in EBF3

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members IPT IPR002909 0.11
Category members Ig_E-set IPR014756 0


Protein complexes (CORUM database) featuring EBF3

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring EBF3

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0007275 multicellular organismal development Database 0.31
Category members GO Category GO:0045893 positive regulation of transcription, DNA-dependent Database 0.28
Category members GO Category GO:0046872 metal ion binding Database 0
Category members GO Category GO:0046983 protein dimerization activity Database 0


© Copyright Svejstrup Laboratory 2015