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Query: DDX50

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
DDX50 0 -0.070 0.580 -0.460 -0.430 -0.414 0.196 0.374 0.579

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
DDX50 Phosphorylation S112 0.850 _RVS(ph)SLDTSTHK_
DDX50 Phosphorylation S113 0.850 _RVS(ph)SLDTSTHK_
DDX50 Ubiquitylation K283 0.530 _LDLSK(gl)LR_
DDX50 Phosphorylation S20 -1.755 _LLWGDIMELEAPLEES(ph)ESQK_
DDX50 Phosphorylation S22 -1.755 _LLWGDIMELEAPLEES(ph)ESQK_

Background Information for DDX50:


Pubmed-DDX50 »
Uniprot-DDX50 »
Biogrid-DDX50 »
ProteomicsDB-DDX50 »

Tumorportal-DDX50 »
COSMIC-DDX50 »
GenomeRNAi-DDX50 »
Genecards-DDX50


Protein-protein Interactions for DDX50
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait HNRNPU Cat. description Hein, Mann, Cell 2015
Category members IP bait NPM1 Cat. description Hein, Mann, Cell 2015
Category members IP bait RPL10 Cat. description Hein, Mann, Cell 2015
Category members IP bait RPL35 Cat. description Hein, Mann, Cell 2015
Category members IP bait GTF3C2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LUC7L Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RBM34 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RRP8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TNFRSF13B Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in DDX50
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members P-loop_NTPase IPR027417 2.83
Category members Helicase_C IPR001650 2.48
Category members Helicase_ATP-bd IPR014001 2.48
Category members Helicase/UvrB_dom IPR006935 0.78
Category members DEAD/DEAH_box_helicase_dom IPR011545 0.35
Category members GUCT IPR012562 0


Protein complexes (CORUM database) featuring DDX50
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring DDX50
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005730 nucleolus Database 13.38
Category members GO Category GO:0005524 ATP binding Database 5.54
Category members GO Category GO:0004386 helicase activity Database 2.49
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0003676 nucleic acid binding Database 0.83
Category members GO Category GO:0008026 ATP-dependent helicase activity Database 0.79
Category members GO Category GO:0016787 hydrolase activity Database 0.22


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