bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: CLPTM1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
CLPTM1 0 -0.493 0.310 -0.170 -1.065 -0.726

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
CLPTM1 Ubiquitylation K460 0.192 1.107 _DK(gl)STYIESSTK_
CLPTM1 Ubiquitylation K458 0.192 0.291 _LSFK(gl)DKSTYIESSTK_
CLPTM1 Ubiquitylation K224 0.130 _NLLTGETEADPEMIK(gl)R_

Background Information for CLPTM1:


Pubmed-CLPTM1 »
Uniprot-CLPTM1 »
Biogrid-CLPTM1 »
ProteomicsDB-CLPTM1 »

Tumorportal-CLPTM1 »
COSMIC-CLPTM1 »
GenomeRNAi-CLPTM1 »
Genecards-CLPTM1


Protein-protein Interactions for CLPTM1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CDCA8 Cat. description Hein, Mann, Cell 2015
Category members IP bait PARD6B Cat. description Hein, Mann, Cell 2015
Category members IP bait RBPJ Cat. description Hein, Mann, Cell 2015
Category members IP bait RNASEH2B Cat. description Hein, Mann, Cell 2015
Category members IP bait SGOL2 Cat. description Hein, Mann, Cell 2015
Category members IP bait SHOC2 Cat. description Hein, Mann, Cell 2015
Category members IP bait ACCN4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ERGIC3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HTR3A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ODF4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SCNN1D Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in CLPTM1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members CLPTM1 IPR008429 0


Protein complexes (CORUM database) featuring CLPTM1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring CLPTM1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0005887 integral to plasma membrane Database 1.69
Category members GO Category GO:0007275 multicellular organismal development Database 0.31
Category members GO Category GO:0030154 cell differentiation Database 0.06
Category members GO Category GO:0009897 external side of plasma membrane Database 0
Category members GO Category GO:0033081 regulation of T cell differentiation in thymus Database 0


.

© Copyright Svejstrup Laboratory 2015