bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: CHORDC1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
CHORDC1 0 0.996 0.370 0.500 -1.560

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
CHORDC1 Phosphorylation T199 0.943 _RKT(ph)SDFNTFLAQEGCTK_
CHORDC1 Phosphorylation S200 0.943 _RKT(ph)SDFNTFLAQEGCTK_
CHORDC1 Ubiquitylation K89 -0.018 0.285 _ELCELK(gl)PK_
CHORDC1 Ubiquitylation K213 0.828 _TSDFNTFLAQEGCTK(gl)GK_

Background Information for CHORDC1:


Pubmed-CHORDC1 »
Uniprot-CHORDC1 »
Biogrid-CHORDC1 »
ProteomicsDB-CHORDC1 »

Tumorportal-CHORDC1 »
COSMIC-CHORDC1 »
GenomeRNAi-CHORDC1 »
Genecards-CHORDC1


Protein-protein Interactions for CHORDC1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CHORDC1 Cat. description Hein, Mann, Cell 2015
Category members IP bait GTF2E2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNRNP27 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait UNC5CL Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait VSIG2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in CHORDC1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members CS_dom IPR007052 0.57
Category members HSP20-like_chaperone IPR008978 0.18
Category members CHORD IPR007051 0


Protein complexes (CORUM database) featuring CHORDC1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring CHORDC1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0010824 regulation of centrosome duplication Database 0.08
Category members GO Category GO:0005575 cellular_component Database 0
Category members GO Category GO:0006950 response to stress Database 0
Category members GO Category GO:0051879 Hsp90 protein binding Database 0
Category members GO Category GO:0061077 chaperone-mediated protein folding Database 0


.

© Copyright Svejstrup Laboratory 2015