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Query: CCDC88C

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
CCDC88C 0 -3.166 1.050 -0.920 -1.472 -0.930

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
CCDC88C Phosphorylation S1601 0.202 0.477 _SES(ph)FSSEDLIPSR_
CCDC88C Ubiquitylation K563 -0.948 -0.495 _QIKDLEQEK(gl)DHLNR_

Background Information for CCDC88C:


Pubmed-CCDC88C »
Uniprot-CCDC88C »
Biogrid-CCDC88C »
ProteomicsDB-CCDC88C »

Tumorportal-CCDC88C »
COSMIC-CCDC88C »
GenomeRNAi-CCDC88C »
Genecards-CCDC88C


Protein-protein Interactions for CCDC88C
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait KATNA1 Cat. description Hein, Mann, Cell 2015
Category members IP bait CCDC88C Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MCM7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in CCDC88C
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Hook-related_fam IPR008636 0.13
Category members Prefoldin IPR009053 0
Category members Fum_Rdtase/Succ_DH_flav-like_C IPR015939 0


Protein complexes (CORUM database) featuring CCDC88C
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring CCDC88C
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0030165 PDZ domain binding Database 0.29
Category members GO Category GO:0016055 Wnt signaling pathway Database 0.11
Category members GO Category GO:0043621 protein self-association Database 0.07
Category members GO Category GO:0001932 regulation of protein phosphorylation Database 0.04
Category members GO Category GO:0016491 oxidoreductase activity Database 0
Category members GO Category GO:0031648 protein destabilization Database 0
Category members GO Category GO:0051260 protein homooligomerization Database 0
Category members GO Category GO:0055114 oxidation-reduction process Database 0


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