bioLOGIC-db

bioLOGIC Data

Query: CCAR1

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
CCAR1	0	-1.137	1.470	-0.530	-0.463	-0.775	-0.479	-0.693	-0.013

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
CCAR1	Phosphorylation	S626	0.799	0.487	_EIS(ph)TPTHWSK_

ProteomicsDB-CCAR1 »

Protein-protein Interactions for CCAR1

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait EMC2	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait JUNB	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait KIFC1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait MMGT1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait MYO1C	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait SGOL2	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait TRAPPC8	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait TSC1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait XRCC3	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait ZBTB48	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait FHL3	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait IKBKG	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait ZYX	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in CCAR1

	Domain name	Domain Description	TC-NER relevance -log10(p-value)
Category members	NA-bd_OB-fold	IPR012340	4.37
Category members	SAP_dom	IPR003034	1.96

Protein complexes (CORUM database) featuring CCAR1

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	Corum	5286	TNF-alpha/NF-kappa B signaling complex 10	Database	0.18

Categories featuring CCAR1

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0005515	protein binding	Database	INF
Category members	GO Category	GO:0005654	nucleoplasm	Database	INF
Category members	GO Category	GO:0010467	gene expression	Database	INF
Category members	Pathway	Pathway_373	REACTOME_MRNA_PROCESSING	0	12.92
Category members	Pathway	Pathway_380	REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA	0	12.24
Category members	GO Category	GO:0008380	RNA splicing	Database	10.77
Category members	GO Category	GO:0000398	mRNA splicing, via spliceosome	Database	7.06
Category members	Pathway	Pathway_377	REACTOME_MRNA_SPLICING	0	6.99
Category members	GO Category	GO:0006915	apoptotic process	Database	2.12
Category members	GO Category	GO:0006351	transcription, DNA-templated	Database	1.07
Category members	GO Category	GO:0003676	nucleic acid binding	Database	0.83
Category members	GO Category	GO:0007049	cell cycle	Database	0.69
Category members	GO Category	GO:0048471	perinuclear region of cytoplasm	Database	0.39
Category members	GO Category	GO:0030374	ligand-dependent nuclear receptor transcription coactivator activity	Database	0.12
Category members	GO Category	GO:0006355	regulation of transcription, DNA-dependent	Database	0