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Query: C5ORF42

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
C5orf42 0 -0.562 1.830 -1.200

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
C5orf42 Ubiquitylation K461 -0.562 _GK(gl)GLNLR_
C5orf42 Ubiquitylation K1608 -1.113 _TK(gl)SQNVFR_
C5orf42 Ubiquitylation K303 -1.338 _GCSNK(gl)SPVVPATLIR_
C5orf42 Ubiquitylation K2678 -1.941 _SDSAEDYLLWK(gl)R_

Background Information for C5orf42:


Pubmed-C5orf42 »
Uniprot-C5orf42 »
Biogrid-C5orf42 »
ProteomicsDB-C5orf42 »

Tumorportal-C5orf42 »
COSMIC-C5orf42 »
GenomeRNAi-C5orf42 »
Genecards-C5orf42


Protein-protein Interactions for C5orf42
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ANAPC2 Cat. description Hein, Mann, Cell 2015
Category members IP bait CEP135 Cat. description Hein, Mann, Cell 2015
Category members IP bait TUBGCP4 Cat. description Hein, Mann, Cell 2015


Protein Domains in C5orf42
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Quino_amine_DH_bsu IPR011044 0


Protein complexes (CORUM database) featuring C5orf42
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring C5orf42
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members Disease phenotype JOUBERT_SYNDROME JOUBERT SYNDROME Database 0.07
Category members Disease phenotype Monomelic_amyotrophy Monomelic amyotrophy Database 0


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