bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: ATP9B

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
ATP9B 0 1.238 -0.650 0.460

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
ATP9B Ubiquitylation K404 0.778 _TGTLTQNEMIFK(gl)R_

Background Information for ATP9B:


Pubmed-ATP9B »
Uniprot-ATP9B »
Biogrid-ATP9B »
ProteomicsDB-ATP9B »

Tumorportal-ATP9B »
COSMIC-ATP9B »
GenomeRNAi-ATP9B »
Genecards-ATP9B


Protein-protein Interactions for ATP9B
Show screen data for Category Name and Description Link to cat description Data Source


Protein Domains in ATP9B
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members ATPase_P-typ_cyto_domN IPR023299 0.18
Category members Cation_transp_P_typ_ATPase IPR001757 0.08
Category members ATPase_P-typ_transduc_dom_A IPR008250 0.08
Category members ATPase_P-typ_Plipid-transp IPR006539 0.04
Category members HAD-like_dom IPR023214 0


Protein complexes (CORUM database) featuring ATP9B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring ATP9B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0000166 nucleotide binding Database 5.91
Category members GO Category GO:0005524 ATP binding Database 5.54
Category members GO Category GO:0048471 perinuclear region of cytoplasm Database 0.39
Category members GO Category GO:0005794 Golgi apparatus Database 0.27
Category members GO Category GO:0019829 cation-transporting ATPase activity Database 0.15
Category members GO Category GO:0005802 trans-Golgi network Database 0.13
Category members Pathway Pathway_99 REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES 0 0.08
Category members Pathway Pathway_182 REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES 0 0
Category members Pathway Pathway_183 REACTOME_ION_CHANNEL_TRANSPORT 0 0
Category members GO Category GO:0000287 magnesium ion binding Database 0
Category members GO Category GO:0004012 phospholipid-translocating ATPase activity Database 0
Category members GO Category GO:0006812 cation transport Database 0
Category members GO Category GO:0015247 aminophospholipid transporter activity Database 0
Category members GO Category GO:0015914 phospholipid transport Database 0
Category members GO Category GO:0015917 aminophospholipid transport Database 0
Category members GO Category GO:0045332 phospholipid translocation Database 0
Category members GO Category GO:0046872 metal ion binding Database 0


.

© Copyright Svejstrup Laboratory 2015