bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: ACTL6B

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
ACTL6B 0 0.225 -0.640 0.740 -0.232 -0.204 0.672 -0.015 0.126

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
ACTL6B Phosphorylation S233 0.000 _EGS(ph)PANWK_
ACTL6B Ubiquitylation K379 0.076 -0.470 _LK(gl)LIANNTTVER_
ACTL6B Ubiquitylation K238 -0.635 _EGSPANWK(gl)R_
ACTL6B Ubiquitylation K242 -0.676 _EK(gl)LPQVTR_
ACTL6B Ubiquitylation K371 -0.788 _ELSQK(gl)TPPSMR_

Background Information for ACTL6B:


Pubmed-ACTL6B »
Uniprot-ACTL6B »
Biogrid-ACTL6B »
ProteomicsDB-ACTL6B »

Tumorportal-ACTL6B »
COSMIC-ACTL6B »
GenomeRNAi-ACTL6B »
Genecards-ACTL6B


Protein-protein Interactions for ACTL6B
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait BCL7A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait BCL7C Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CHRNG Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DPF2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DPF3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HIST1H2BA Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RUVBL1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RUVBL2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC35A5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC38A7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SMARCC2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SMARCD1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SS18 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait YEATS4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in ACTL6B
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Actin-related IPR004000 0.11


Protein complexes (CORUM database) featuring ACTL6B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring ACTL6B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005730 nucleolus Database 13.38
Category members GO Category GO:0006325 chromatin organization Database 5.02
Category members GO Category GO:0006338 chromatin remodeling Database 4.95
Category members GO Category GO:0003713 transcription coactivator activity Database 3.68
Category members GO Category GO:0016514 SWI/SNF complex Database 2.12
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0006357 regulation of transcription from RNA polymerase II promoter Database 0.19
Category members GO Category GO:0005200 structural constituent of cytoskeleton Database 0
Category members GO Category GO:0007399 nervous system development Database 0


.

© Copyright Svejstrup Laboratory 2015