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Query: ABCF2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
ABCF2 1 0.753 1.840 -1.190 -0.895 0.730 -0.889 -0.610

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
ABCF2 Ubiquitylation K174 0.732 1.685 _AMLEK(gl)EAER_
ABCF2 Ubiquitylation K315 -0.286 0.875 _YYTGNYDQYVK(gl)TR_
ABCF2 Ubiquitylation K618 -0.993 0.022 _LVDEEPQLTK(gl)R_
ABCF2 Ubiquitylation K508 -0.924 -0.059 _YGLTGK(gl)QQVSPIR_
ABCF2 Ubiquitylation K351 0.144 -0.119 _FGHGSAK(gl)LAR_
ABCF2 Ubiquitylation K326 -0.181 _TRLELEENQMK(gl)R_
ABCF2 Ubiquitylation K365 -0.210 _TLQK(gl)MMASGLTER_

Background Information for ABCF2:


Pubmed-ABCF2 »
Uniprot-ABCF2 »
Biogrid-ABCF2 »
ProteomicsDB-ABCF2 »

Tumorportal-ABCF2 »
COSMIC-ABCF2 »
GenomeRNAi-ABCF2 »
Genecards-ABCF2


Protein-protein Interactions for ABCF2
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait MAD2L1 Cat. description Hein, Mann, Cell 2015
Category members IP bait MIS12 Cat. description Hein, Mann, Cell 2015
Category members IP bait NFYC Cat. description Hein, Mann, Cell 2015
Category members IP bait NPM1 Cat. description Hein, Mann, Cell 2015
Category members IP bait PPP5C Cat. description Hein, Mann, Cell 2015
Category members IP bait RPL10 Cat. description Hein, Mann, Cell 2015
Category members IP bait SMC1A Cat. description Hein, Mann, Cell 2015
Category members IP bait TM9SF4 Cat. description Hein, Mann, Cell 2015
Category members IP bait USO1 Cat. description Hein, Mann, Cell 2015
Category members IP bait ABCF2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in ABCF2
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members P-loop_NTPase IPR027417 2.83
Category members AAA+_ATPase IPR003593 0.38
Category members ABC_transporter-like IPR003439 0.15


Protein complexes (CORUM database) featuring ABCF2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 1335 SNW1 complex Database 3.59


Categories featuring ABCF2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0000166 nucleotide binding Database 5.91
Category members GO Category GO:0005524 ATP binding Database 5.54
Category members GO Category GO:0016887 ATPase activity Database 2.28
Category members GO Category GO:0005739 mitochondrion Database 1.67
Category members GO Category GO:0017111 nucleoside-triphosphatase activity Database 0.5
Category members GO Category GO:0043190 ATP-binding cassette (ABC) transporter complex Database 0.01
Category members GO Category GO:0005215 transporter activity Database 0
Category members GO Category GO:0005740 mitochondrial envelope Database 0
Category members GO Category GO:0006810 transport Database 0


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