bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: AASDHPPT

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
AASDHPPT 1 2.012 0.720 -0.450 -0.914

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
AASDHPPT Phosphorylation S258 4.002 _HQDVPS(ph)QDDSKPTQR_
AASDHPPT Ubiquitylation K58 -0.386 _IGQFVFARDAK(gl)_
AASDHPPT Ubiquitylation K45 -0.690 -0.909 _SIQPEEK(gl)ER_
AASDHPPT Ubiquitylation K89 -1.008 _TAK(gl)GKPVLAK_

Background Information for AASDHPPT:





Protein-protein Interactions for AASDHPPT

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait AASDHPPT Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ANGPTL4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PPP1R3C Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in AASDHPPT

Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring AASDHPPT

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring AASDHPPT

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members Pathway Pathway_22 KEGG_LYSINE_DEGRADATION 0 0.8
Category members GO Category GO:0044281 small molecule metabolic process Database 0.35
Category members GO Category GO:0006767 water-soluble vitamin metabolic process Database 0.27
Category members GO Category GO:0006766 vitamin metabolic process Database 0.23
Category members Pathway Pathway_279 REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS 0 0.18
Category members GO Category GO:0015939 pantothenate metabolic process Database 0.03
Category members Pathway Pathway_412 REACTOME_VITAMIN_B5_PANTOTHENATE_METABOLISM 0 0
Category members GO Category GO:0000287 magnesium ion binding Database 0
Category members GO Category GO:0006633 fatty acid biosynthetic process Database 0
Category members GO Category GO:0009059 macromolecule biosynthetic process Database 0


© Copyright Svejstrup Laboratory 2015