Results for the Category
U6 snRNA binding
(GO:0017070)
| RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
| W | |||||||
| Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
|---|---|---|---|---|---|---|---|---|
| PRPF8 | 2 | 0.601 | -0.444 | 0.045 | -0.568 | -0.007 | ||
| LSM8 | 1 | -1.730 | 3.040 | -0.554 | -0.140 | |||
| LSM7 | 1 | -2.240 | 3.880 | |||||
| EIF5A | 0 | 1.030 | -0.800 | -0.044 | 1.340 | -1.175 | 0.031 | 0.025 |
| EIF5A | 0 | 1.250 | -0.860 | -0.044 | 1.340 | -1.175 | 0.031 | 0.025 |
| Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
|---|---|---|---|---|---|
| EIF5A | Phosphorylation | T9 | -0.003 | 0.305 | _ADDLDFET(ph)GDAGASATFPM(ox)QCSALR_ |
| EIF5A | Ubiquitylation | K27 | -0.023 | -0.373 | _K(gl)NGFVVLK_ |
| EIF5A | Ubiquitylation | K34 | -0.015 | -0.550 | _NGFVVLK(gl)GRPCK_ |
| EIF5A | Ubiquitylation | K39 | 1.330 | 0.690 | _GRPCK(gl)IVEM(ox)STSK_ |
| EIF5A | Ubiquitylation | K67 | 0.127 | _VHLVGIDIFTGK(gl)K_ | |
| EIF5A | Ubiquitylation | K68 | 0.088 | _VHLVGIDIFTGKK(gl)_ | |
| EIF5A | Ubiquitylation | K85 | -0.842 | -0.793 | _YEDICPSTHNMDVPNIK(gl)R_ |
| EIF5A | Ubiquitylation | K121 | -0.654 | _EDLRLPEGDLGK(gl)EIEQK_ | |
| LSM7 | Ubiquitylation | K17 | -0.496 | _ESILDLSK(gl)YIDK_ | |
| LSM7 | Ubiquitylation | K26 | -0.221 | -0.411 | _VK(gl)FQGGR_ |
| PRPF8 | Ubiquitylation | K36 | 1.198 | _K(gl)WQQLQAK_ | |
| PRPF8 | Ubiquitylation | K218 | 0.783 | _K(gl)YVNGSTYQR_ | |
| PRPF8 | Ubiquitylation | K442 | -0.412 | -0.328 | _EHCPAGQPVK(gl)VR_ |
| PRPF8 | Ubiquitylation | K449 | 0.961 | _VSYQK(gl)LLK_ | |
| PRPF8 | Ubiquitylation | K785 | 1.193 | 0.381 | _LYLK(gl)AEQER_ |
| PRPF8 | Ubiquitylation | K847 | 4.280 | 4.737 | _LK(gl)EAYSVK_ |
| PRPF8 | Ubiquitylation | K853 | 0.313 | 0.906 | _EAYSVK(gl)SR_ |
| PRPF8 | Ubiquitylation | K1131 | -0.581 | _YLTEHPDPNNENIVGYNNK(gl)K_ | |
| PRPF8 | Ubiquitylation | K1132 | -0.621 | _YLTEHPDPNNENIVGYNNKK(gl)_ | |
| PRPF8 | Ubiquitylation | K1144 | 1.075 | 0.092 | _LMK(gl)HDVNLGR_ |
| PRPF8 | Ubiquitylation | K1158 | 0.553 | _AVFWDIK(gl)NR_ | |
| PRPF8 | Ubiquitylation | K1300 | 1.721 | _IK(gl)IGLNSK_ | |
| PRPF8 | Ubiquitylation | K1344 | 0.647 | _WSK(gl)QTDVGITHFR_ | |
| PRPF8 | Ubiquitylation | K1392 | 0.488 | 0.214 | _VWAEYALK(gl)R_ |
| PRPF8 | Ubiquitylation | K1443 | 0.849 | 0.161 | _TDFK(gl)QYQVLK_ |
| PRPF8 | Ubiquitylation | K1735 | 0.067 | _IMK(gl)ANPALYVLR_ | |
| PRPF8 | Ubiquitylation | K1859 | -0.720 | _SLPVEEQPK(gl)QIIVTR_ | |
| PRPF8 | Ubiquitylation | K1993 | 0.886 | -0.521 | _DLILADYGK(gl)K_ |
| PRPF8 | Ubiquitylation | K1994 | 0.886 | -0.521 | _DLILADYGK(gl)K_ |
| PRPF8 | Ubiquitylation | K2031 | 0.976 | _QQIAEIEK(gl)QTK_ | |
| PRPF8 | Ubiquitylation | K2034 | 0.488 | 0.601 | _QTK(gl)EQSQLTATQTR_ |
| PRPF8 | Ubiquitylation | K2140 | -0.848 | _AQIAGYLYGVSPPDNPQVK(gl)EIR_ |
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© Copyright Svejstrup Laboratory 2015