bioLOGIC Category
Results for the Category
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
(GO:0000447)
| RNAi screen result
|
RNAPII IP (MG132) |
CSB IP |
CSB IP (MG132) |
Chrom. |
Chrom. (MG132) |
Ubi /Phospo |
Ubi /Phospho (MG132) |
| W |
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| Gene name |
MGoogle Score |
RNAi high |
RNAi low |
RNAPII-IP (MG132) |
CSB-IP |
CSB-IP (MG132) |
Chrom. |
Chrom. (MG132) |
|
RPS21
|
2
|
|
|
0.057
|
-1.200
|
0.115
|
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RPS21
|
2
|
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|
-0.703
|
0.849
|
|
NOP14
|
0
|
1.260
|
-0.910
|
|
|
0.712
|
-0.455
|
0.213
|
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UTP20
|
0
|
0.090
|
-0.090
|
|
|
|
-0.209
|
0.133
|
| Gene name |
PTM type |
PTM site |
UV |
UV (MG132) |
Sequence |
|
NOP14
|
Phosphorylation
|
S96
|
-0.183
|
-0.178
|
_RFGEYNSNM(ox)S(ph)PEEK_
|
|
RPS21
|
Ubiquitylation
|
K41
|
2.468
|
|
_DHASIQMNVAEVDK(gl)VTGR_
|
|
RPS21
|
Ubiquitylation
|
K51
|
|
1.862
|
_FNGQFK(gl)TYAICGAIR_
|
|
RPS21
|
Ubiquitylation
|
K74
|
0.895
|
|
_LAK(gl)ADGIVSK_
|
|
RPS21
|
Ubiquitylation
|
K81
|
0.215
|
0.979
|
_ADGIVSK(gl)NF_
|
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UTP20
|
Phosphorylation
|
T1741
|
0.092
|
-0.062
|
_SLSDNGQPGT(ph)PDPADSGGTSAK_
|
© Copyright Svejstrup Laboratory 2015