RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
RAD50	3	0.350	-0.420	0.165	0.571	0.509	0.691	0.587
JUN	3	-0.930	0.930			-0.126
BRCA1	2	0.200	-0.140	0.433			0.018	0.146
NBN	2	-0.220	-0.170		0.708	0.569	-0.563	0.354
CHEK1	2	-1.170	1.560
CHEK1	2	-1.170	1.560
CHEK2	2	0.530	0.100
MRE11A	0	1.600	-0.730		0.145	0.420
MRE11A	0	1.600	-0.730	0.023			0.453	0.150
RAD51	0	-1.260	1.920
ABL1	0	0.670	-0.070
RBBP8	0	0.120	0.020
NFKB1	0	0.720	-0.810
GADD45A	0	1.050	-0.170
CDKN1A	0	1.080	-0.750
MDM2	0	-0.210	0.080
TP53	0	-1.070	1.050	-2.808	0.076	-0.094	0.436	0.497
ATM	0						0.398	0.474
RELA	0	-1.130	1.600	0.793

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ABL1	Phosphorylation	S1083	-1.131	-0.857	_GQGESDPLDHEPAVS(ph)PLLPR_
ABL1	Phosphorylation	S1134		0.293	_SSS(ph)FREMDGQPER_
ABL1	Phosphorylation	S1232	0.821	0.183	_SCS(ph)ASCVPHGAK_
ATM	Ubiquitylation	K307		-0.196	_GAYESTK(gl)WR_
ATM	Ubiquitylation	K331		-0.126	_GK(gl)YSSGFR_
ATM	Ubiquitylation	K385		-0.669	_ESSDYSVPCK(gl)R_
ATM	Ubiquitylation	K1101		-0.548	_LFQDTK(gl)GDSSR_
ATM	Ubiquitylation	K1109		-1.666	_LLK(gl)ALPLK_
ATM	Ubiquitylation	K1698		-1.026	_DASYTK(gl)ALK_
ATM	Ubiquitylation	K1738		-0.137	_SAAVTCLK(gl)NILATK_
ATM	Ubiquitylation	K2025		-1.497	_SIGEPDSLYGCGGGK(gl)MLQPITR_
BRCA1	Phosphorylation	S123	0.465	0.445	_KENNSPEHLKDEVS(ph)IIQSM(ox)GYR_
BRCA1	Phosphorylation	S753	2.662	4.077	_VSNNAEDPKDLMLS(ph)GER_
BRCA1	Phosphorylation	S1009	0.733	1.028	_KNLLEENFEEHSM(ox)S(ph)PER_
BRCA1	Phosphorylation	S1546	1.821	2.105	_NYPS(ph)QEELIK_
BRCA1	Phosphorylation	S1564		3.065	_VVDVEEQQLEES(ph)GPHDLTETSYLPR_
BRCA1	Phosphorylation	S1664		1.120	_EKPELTAS(ph)TER_
CDKN1A	Ubiquitylation	K188	-2.505	-1.077	_QTSMTDFYHSK(gl)R_
CHEK1	Ubiquitylation	K53	0.879		_AVDCPENIK(gl)K_
CHEK1	Ubiquitylation	K54	0.738		_AVDCPENIKK(gl)_
CHEK1	Phosphorylation	S296	-0.098	0.184	_VTS(ph)GGVSESPSGFSK_
CHEK1	Phosphorylation	S300		1.091	_VTSGGVS(ph)ESPSGFSK_
CHEK1	Phosphorylation	S302	1.750		_VTSGGVSES(ph)PSGFSK_
CHEK1	Phosphorylation	S317		1.903	_HIQSNLDFS(ph)PVNSASSEENVK_
CHEK1	Ubiquitylation	K399	-0.582		_ETCEK(gl)LGYQWK_
CHEK2	Phosphorylation	S260	3.670	3.632	_KFAIGS(ph)AR_
CHEK2	Ubiquitylation	K437		-0.826	_TQVSLK(gl)DQITSGK_
GADD45A	Ubiquitylation	K12	-0.515	0.281	_TLEEFSAGEQK(gl)TER_
GADD45A	Ubiquitylation	K29		0.092	_VGDALEEVLSK(gl)ALSQR_
JUN	Phosphorylation	S58	-0.167	-1.247	_AKNS(ph)DLLTSPDVGLLK_
JUN	Phosphorylation	T62	2.545	1.674	_NSDLLT(ph)SPDVGLLK_
JUN	Phosphorylation	S63	2.030	1.458	_NSDLLTS(ph)PDVGLLK_
JUN	Ubiquitylation	K70	9.213		_NSDLLTSPDVGLLK(gl)_
JUN	Phosphorylation	S73	1.499	0.845	_LAS(ph)PELER_
JUN	Phosphorylation	S243	-0.642	-1.399	_LQALKEEPQTVPEMPGETPPLS(ph)PIDMESQER_
JUN	Ubiquitylation	K309	1.034	0.155	_EQVAQLK(gl)QK_
MDM2	Phosphorylation	S166	0.576	1.068	_AIS(ph)ETEENSDELSGER_
MDM2	Ubiquitylation	K334		-0.872	_ENWLPEDK(gl)GK_
MDM2	Ubiquitylation	K336		-0.872	_ENWLPEDK(gl)GK_
MDM2	Ubiquitylation	K363		0.883	_LENSTQAEEGFDVPDCK(gl)K_
MDM2	Ubiquitylation	K364		0.883	_LENSTQAEEGFDVPDCK(gl)K_
MDM2	Ubiquitylation	K473		0.806	_NK(gl)PCPVCR_
MRE11A	Ubiquitylation	K387	0.442		_FSQK(gl)FVDR_
NBN	Phosphorylation	T335		-1.121	_T(ph)TTPGPSLSQGVSVDEK_
NBN	Phosphorylation	S341	3.085		_TTTPGPS(ph)LSQGVSVDEK_
NBN	Phosphorylation	S343	3.710	3.629	_TTTPGPSLS(ph)QGVSVDEK_
NBN	Phosphorylation	S397	2.719	1.458	_MLS(ph)QDAPTVK_
NBN	Phosphorylation	S432	-0.192	-0.395	_IPNYQLS(ph)PTK_
NBN	Phosphorylation	T434	-0.188	-0.683	_IPNYQLSPT(ph)KLPSINK_
NBN	Phosphorylation	S615	1.985	4.691	_IS(ph)QENEIGKK_
NFKB1	Phosphorylation	S907	-0.025	0.113	_TTSQAHSLPLS(ph)PASTR_
RAD50	Ubiquitylation	K62	-1.069		_YICTGDFPPGTK(gl)GNTFVHDPK_
RAD50	Phosphorylation	S635	2.474	3.050	_LFDVCGS(ph)QDFESDLDR_
RAD50	Ubiquitylation	K753	0.394	0.397	_NK(gl)LQNVNR_
RAD50	Ubiquitylation	K933	0.397		_FQQEKEELINKK(gl)_
RAD50	Ubiquitylation	K1068	0.098		_LEENIDNIK(gl)R_
RAD50	Ubiquitylation	K1178	-0.548		_SDADENVSASDK(gl)RR_
RAD50	Ubiquitylation	K1285	2.195		_SEYVEK(gl)FYR_
RAD51	Ubiquitylation	K64	-1.228		_KELINIK(gl)GISEAK_
RBBP8	Phosphorylation	S327	-0.154	0.038	_VSS(ph)PVFGATSSIK_
TP53	Ubiquitylation	K120	-0.188		_LGFLHSGTAK(gl)SVTCTYSPALNK_
TP53	Ubiquitylation	K164	0.157	-1.260	_AMAIYK(gl)QSQHMTEVVR_
TP53	Phosphorylation	S314	-0.695	-1.000	_ALPNNTSS(ph)SPQPK_
TP53	Phosphorylation	S315	-0.762	-0.959	_RALPNNTSSS(ph)PQPK_
TP53	Ubiquitylation	K320	-0.978		_ALPNNTSSSPQPKK(gl)_
TP53	Ubiquitylation	K357	-0.231	-0.823	_ELNEALELKDAQAGK(gl)EPGGSR_