RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
HMGB1	2	-1.590	3.400		2.856	-1.899	0.030	-0.792
TRIM25	1	-0.120	-0.240				0.224	-1.159
TRAF2	1	-0.570	0.540
TRAF2	1	-0.570	0.540
NFKB2	0	1.750	-0.820
MAVS	0	1.610	-0.380				-1.056	-0.630
MAP3K1	0	0.750	-1.270
IKBKB	0	0.400	0.610
IFIH1	0	1.630	-0.790
APP	0	0.100	-0.260					0.285
RELA	0	-1.130	1.600	0.793
CHUK	0			-0.480

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
APP	Ubiquitylation	K751	-1.778	-1.280	_HLSK(gl)M(ox)QQNGYENPTYK_
CHUK	Ubiquitylation	K296		-1.637	_GGPVDLTLK(gl)QPR_
HMGB1	Ubiquitylation	K50	0.651		_WK(gl)TMSAK_
HMGB1	Ubiquitylation	K59	1.001	0.009	_GK(gl)FEDMAK_
HMGB1	Ubiquitylation	K114		0.314	_IK(gl)GEHPGLSIGDVAK_
HMGB1	Ubiquitylation	K127	0.018		_IKGEHPGLSIGDVAK(gl)K_
HMGB1	Ubiquitylation	K128	-0.407		_K(gl)LGEMWNNTAADDKQPYEK_
HMGB1	Ubiquitylation	K157	0.850		_YEK(gl)DIAAYR_
IFIH1	Phosphorylation	S301		-1.067	_AS(ph)PEPELQLRPYQMEVAQPALEGK_
IKBKB	Ubiquitylation	K106	0.253		_K(gl)YLNQFENCCGLR_
IKBKB	Phosphorylation	S672	0.670	0.244	_GPVSGS(ph)PDSMNASR_
MAP3K1	Phosphorylation	S292		0.209	_RAPS(ph)PDGFSPYSPEETNR_
MAP3K1	Phosphorylation	S506	1.427		_SHDFYSHELS(ph)SPVDSPSSLR_
MAP3K1	Phosphorylation	S507		1.436	_SHDFYSHELSS(ph)PVDSPSSLR_
MAP3K1	Phosphorylation	S923	0.127	-0.120	_LSAS(ph)SEDISER_
MAVS	Phosphorylation	S152	0.146	-0.466	_EKEPSYPMPVQETQAPES(ph)PGENSEQALQTLSPR_
MAVS	Phosphorylation	S165		-0.888	_EKEPSYPMPVQETQAPESPGENSEQALQTLS(ph)PR_
MAVS	Phosphorylation	S222	1.349	1.006	_GPVS(ph)PSVSFQPLAR_
MAVS	Ubiquitylation	K362	0.082		_AGMVPSK(gl)VPTSMVLTK_
NFKB2	Ubiquitylation	K741		-2.393	_GHTPLDLTCSTK(gl)VK_
NFKB2	Ubiquitylation	K743	-0.624		_GHTPLDLTCSTKVK(gl)_
TRAF2	Phosphorylation	T7	-0.822	-1.190	_(ac)AAASVT(ph)PPGSLELLQPGFSK_
TRAF2	Ubiquitylation	K27	-0.253	2.194	_TLLGTK(gl)LEAK_
TRAF2	Ubiquitylation	K119		0.519	_GTLK(gl)EYESCHEGR_
TRAF2	Ubiquitylation	K176	-1.233	1.022	_APCCGADVK(gl)AHHEVCPK_
TRAF2	Ubiquitylation	K207	0.147	0.918	_FQDHVK(gl)TCGK_
TRAF2	Ubiquitylation	K481	-0.507	0.417	_MEAK(gl)NSYVR_
TRIM25	Phosphorylation	S114	-0.310	-0.309	_ASAPS(ph)PNAQVACDHCLK_
TRIM25	Ubiquitylation	K453	1.749		_AK(gl)VLETFLAK_