bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Category

Results for the Category
REACTOME_CELL_EXTRACELLULAR_MATRIX_INTERACTIONS
(Pathway_923)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
ACTN1 2 0.970 -0.750 1.417 -0.948
ACTN1 2 0.970 -0.750 0.936 1.929 -1.407 0.572 0.293
ACTN1 2 0.970 -0.750 0.790 0.055 0.246
FERMT2 1 0.290 -0.340 1.597
VASP 1 0.180 0.270 1.849
ILK 1 -1.560 3.680 -0.463 -0.527
FLNC 0 0.570 0.010 -0.219 -0.558 0.899 0.710
ARHGEF6 0 0.570 -0.210
ARHGEF6 0 0.570 -0.210
RSU1 0 -0.550 0.420 0.638 -0.925
ITGB1 0 0.390 -0.650 0.101 -0.036
LIMS1 0 -0.640 0.490 -0.812
LIMS3L 0 -0.812
PARVA 0 -0.710 1.020

PTM Sites:

Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
ACTN1 Phosphorylation S6 -0.679 0.700 _(ac)MDHYDS(ph)QQTNDYMQPEEDWDRDLLLDPAWEK_
ACTN1 Phosphorylation Y12 1.047 _(ac)MDHYDSQQTNDY(ph)M(ox)QPEEDWDRDLLLDPAWEK_
ACTN1 Ubiquitylation K125 1.906 _ALDFIASKGVK(gl)_
ACTN1 Ubiquitylation K350 0.585 _VQEK(gl)CQLEINFNTLQTK_
ACTN1 Ubiquitylation K417 0.789 _LDHLAEK(gl)FR_
ACTN1 Ubiquitylation K592 -0.644 0.678 _EAILAIHK(gl)EAQR_
ACTN1 Ubiquitylation K760 0.273 1.507 _DAK(gl)GISQEQMQEFR_
ARHGEF6 Phosphorylation S225 -0.163 -0.076 _SSERPLS(ph)PK_
ARHGEF6 Phosphorylation S415 0.662 0.947 _M(ox)S(ph)GFIYQGK_
ARHGEF6 Phosphorylation S600 0.797 _S(ph)TAALEEDAQILK_
ARHGEF6 Phosphorylation T601 0.797 _S(ph)TAALEEDAQILK_
ARHGEF6 Phosphorylation S684 0.068 -0.061 _KDS(ph)IPQVLLPEEEKLIIEETR_
FERMT2 Phosphorylation S159 -0.331 -0.390 _KLDDQS(ph)EDEALELEGPLITPGSGSIYSSPGLYSK_
FLNC Phosphorylation S2233 0.713 0.170 _LGS(ph)FGSITR_
ILK Ubiquitylation K85 -0.777 _DIVQK(gl)LLQYK_
ILK Ubiquitylation K426 -0.300 _LMK(gl)ICMNEDPAK_
ILK Ubiquitylation K435 -2.732 _ICMNEDPAK(gl)RPK_
ITGB1 Ubiquitylation K774 0.402 _MNAK(gl)WDTGENPIYK_
ITGB1 Ubiquitylation K784 -0.172 0.350 _WDTGENPIYK(gl)SAVTTVVNPK_
ITGB1 Ubiquitylation K794 0.755 0.604 _SAVTTVVNPK(gl)YEGK_
PARVA Phosphorylation T3 -0.031 0.005 _(ac)AT(ph)SPQKS(ph)PSVPK_
PARVA Phosphorylation S4 -0.031 0.005 _(ac)ATS(ph)PQKS(ph)PSVPK_
PARVA Phosphorylation S8 -0.343 -0.395 _(ac)AT(ph)SPQKS(ph)PSVPK_
PARVA Phosphorylation S10 -1.421 -1.107 _SPS(ph)VPKSPTPK_
PARVA Phosphorylation S14 -0.492 -0.182 _SPSVPKS(ph)PTPK_
PARVA Phosphorylation T16 -0.703 _SPT(ph)PKSPPSR_
PARVA Phosphorylation S19 -0.513 -0.721 _SPTPKS(ph)PPSR_
VASP Phosphorylation S239 0.625 -0.774 _VS(ph)KQEEASGGPTAPK_


© Copyright Svejstrup Laboratory 2015