RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
BRCA1	2	0.200	-0.140	0.433			0.018	0.146
KIF4A	2	0.450	-0.410				-0.346	-0.337
KIF4A	2	0.450	-0.410		0.413
PHIP	2	0.650	-0.230				0.434	0.305
WAC	1	1.080	-0.710				-2.718	0.290
CTCF	1	-0.190	0.040	1.656	0.503	0.229	0.942	0.519
QKI	0	1.130	-0.950				-2.091	-0.975
QKI	0	1.130	-0.950	-1.223
ASH1L	0	1.230	-0.360				-0.777	-0.350
TUBA1A	0	0.200	-0.030		0.742	-0.126	0.853	0.585
PACS1	0	-1.200	1.680

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ASH1L	Phosphorylation	S1748	-0.660	-0.694	_SIDAVIATASAPPSSS(ph)PGR_
BRCA1	Phosphorylation	S123	0.465	0.445	_KENNSPEHLKDEVS(ph)IIQSM(ox)GYR_
BRCA1	Phosphorylation	S753	2.662	4.077	_VSNNAEDPKDLMLS(ph)GER_
BRCA1	Phosphorylation	S1009	0.733	1.028	_KNLLEENFEEHSM(ox)S(ph)PER_
BRCA1	Phosphorylation	S1546	1.821	2.105	_NYPS(ph)QEELIK_
BRCA1	Phosphorylation	S1564		3.065	_VVDVEEQQLEES(ph)GPHDLTETSYLPR_
BRCA1	Phosphorylation	S1664		1.120	_EKPELTAS(ph)TER_
KIF4A	Ubiquitylation	K613	1.103		_LQELEGQIADLK(gl)K_
KIF4A	Ubiquitylation	K614	1.103		_LQELEGQIADLK(gl)K_
KIF4A	Ubiquitylation	K715	0.852	1.337	_LK(gl)DALQK_
KIF4A	Phosphorylation	T802	1.153		_RT(ph)FSLTEVR_
KIF4A	Phosphorylation	S804	1.144	0.733	_TFS(ph)LTEVR_
KIF4A	Phosphorylation	S818	-0.103		_GQVSESEDS(ph)ITK_
KIF4A	Phosphorylation	T820	0.302	0.224	_GQVSESEDSIT(ph)K_
KIF4A	Ubiquitylation	K883	-0.435		_IQVSK(gl)LESSLK_
KIF4A	Ubiquitylation	K993	0.075		_QK(gl)LTLLQVASR_
KIF4A	Phosphorylation	T1184		-1.056	_T(ph)PPAPSPFDLPELK_
KIF4A	Phosphorylation	S1228	1.720	2.072	_RALASNTSFFSGCS(ph)PIEEEAH_
PACS1	Phosphorylation	T429		1.102	_DTT(ph)SPMELAALEK_
PACS1	Phosphorylation	S430		1.190	_DTTS(ph)PMELAALEK_
PACS1	Phosphorylation	S493		0.618	_TDLQGS(ph)ASPSKVEGVHTPR_
PACS1	Phosphorylation	S495	-0.220		_TDLQGSAS(ph)PSKVEGVHTPR_
PHIP	Ubiquitylation	K6	1.214		_K(gl)GLSELR_
PHIP	Ubiquitylation	K65	0.460		_TYQNLVK(gl)YYR_
PHIP	Phosphorylation	S674	0.709	0.567	_LSRGS(ph)ISSTSEVHSPPNVGLR_
PHIP	Ubiquitylation	K767	0.459		_ENK(gl)IPTVSK_
PHIP	Phosphorylation	S911	0.029	-0.103	_VNEEKDGPIS(ph)PKK_
PHIP	Ubiquitylation	K1005	0.642		_EQELMK(gl)IVGIK_
PHIP	Ubiquitylation	K1032	-0.023		_LAFLDPDTGK(gl)LTGGSFTMK_
PHIP	Ubiquitylation	K1062	1.216	0.801	_QQFDDAK(gl)YRR_
PHIP	Phosphorylation	S1315	2.743	1.429	_AQS(ph)YDIQAWKK_
PHIP	Ubiquitylation	K1383	-0.669		_ETLEAGNYESPMELCK(gl)DVR_
PHIP	Phosphorylation	S1525		-0.688	_VVVDPVVTEQPSTSS(ph)AAK_
PHIP	Ubiquitylation	K1528	-0.207		_VVVDPVVTEQPSTSSAAK(gl)TFITK_
PHIP	Ubiquitylation	K1533	1.039		_TFITK(gl)ANASAIPGK_
PHIP	Phosphorylation	S1560	-0.176	0.420	_ALNTLSS(ph)PGQSSFSHGTR_
PHIP	Ubiquitylation	K1602	1.984		_ASTLSK(gl)SSAVIEQGDCK_
PHIP	Phosphorylation	S1651		-0.008	_VEVNTNS(ph)GEIIHK_
PHIP	Phosphorylation	S1783	0.754	0.729	_TAFYNEDDS(ph)EEEQR_
PHIP	Ubiquitylation	K1815	1.427	0.364	_AK(gl)ANLIGW_
QKI	Ubiquitylation	K91	-0.019	-0.167	_LYVPVK(gl)EYPDFNFVGR_
QKI	Ubiquitylation	K111	0.236	0.638	_GLTAK(gl)QLEAETGCK_
QKI	Ubiquitylation	K190		-0.178	_LLVPAAEGEDSLK(gl)K_
QKI	Ubiquitylation	K191	0.259	-0.178	_LLVPAAEGEDSLKK(gl)_
WAC	Phosphorylation	S53	0.433	0.072	_MRDAGDPS(ph)PPNK_
WAC	Phosphorylation	S64	0.472	0.441	_SDS(ph)PENKYSDSTGHSK_
WAC	Phosphorylation	T293	2.401	1.442	_LPT(ph)PTSSVPAQK_
WAC	Phosphorylation	S511	1.112	0.116	_QQGHEPVS(ph)PR_