Results for the Category
Sec23/24_trunk_dom
(IPR006896)
| RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
| W | |||||||
| Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
|---|---|---|---|---|---|---|---|---|
| SEC23A | 1 | -1.970 | 3.860 | 0.314 | 0.139 | -0.515 | ||
| SEC23B | 0 | -0.860 | 0.650 | -0.294 | -0.827 | |||
| SEC24A | 0 | 0.060 | -0.210 | 0.162 | -0.582 | |||
| SEC24B | 0 | -0.430 | 0.680 | -0.093 | -0.387 | |||
| SEC24C | 0 | 0.420 | -0.360 | -0.393 |
| Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
|---|---|---|---|---|---|
| SEC23B | Ubiquitylation | K208 | -0.684 | _QIQDMLGLTK(gl)PAMPMQQAR_ | |
| SEC23B | Ubiquitylation | K260 | -1.638 | _DPWPVTQGK(gl)RPLR_ | |
| SEC23B | Ubiquitylation | K320 | -0.124 | -0.120 | _SWHDIEK(gl)DNAR_ |
| SEC23B | Ubiquitylation | K331 | -0.911 | 0.319 | _ATK(gl)HYEM(ox)LANR_ |
| SEC23B | Ubiquitylation | K558 | -1.187 | _LCQK(gl)FGQYNK(gl)EDPTSFR_ | |
| SEC23B | Ubiquitylation | K564 | -0.583 | -0.895 | _LCQK(gl)FGQYNK(gl)EDPTSFR_ |
| SEC23B | Ubiquitylation | K671 | -0.713 | _K(gl)AGYQDMPEYENFK_ | |
| SEC24B | Phosphorylation | S1254 | -0.049 | _DSRPLS(ph)PILHIVKDESPAK_ | |
| SEC24C | Ubiquitylation | K956 | -2.127 | -1.632 | _LLPLTK(gl)SPVESTTEPPAVR_ |
.
© Copyright Svejstrup Laboratory 2015