RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
PPIE	2	-2.470	3.680	0.176			-1.635	-1.146
PPIE	2	-2.470	3.680		2.485	0.018	1.294	0.696
PPIG	2	1.740	-1.060				0.126	0.417
PPIA	2	4.080	-1.410	0.241	1.212	-1.216	0.426	-0.190
PPIL3	2	-0.060	-0.340				1.550	2.028
PPIF	1	-1.500	1.620		2.485	0.018	1.294	0.696
PPIL2	1	-1.310	2.810				-0.614	-0.728
RGPD3	1			1.079	-0.385		0.549	0.456
PPIB	1	-0.320	1.070		1.818	-1.512	0.460	0.205
PPID	1	-1.370	2.540	0.555			-0.303	-0.018
PPIAL4D	1			0.241	1.212	-1.216	0.426	-0.190
PPWD1	0	0.270	-0.040	-0.408		1.134	-1.334	0.193
NKTR	0	0.520	-0.300				-0.168	-0.166
PPIL4	0	-1.010	1.660	0.679	-0.267	0.136	0.103	-0.079
PPIL1	0	0.760	0.070	-0.749			-2.249	-0.866
CWC27	0	1.000	-0.570				0.745	0.113
PPIH	0			-0.289	-0.626	-0.300	0.083	0.239

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
CWC27	Phosphorylation	S203		0.482	_NFS(ph)LLSFGEEAEEEEEEVNR_
CWC27	Phosphorylation	S206	0.566	0.047	_NFSLLS(ph)FGEEAEEEEEEVNR_
NKTR	Phosphorylation	S379	0.117	0.216	_AYRPPS(ph)GEK_
NKTR	Phosphorylation	S463	1.176	1.091	_ILIPS(ph)DIESSK_
NKTR	Phosphorylation	T1155	-0.080	0.057	_LDT(ph)PDINIVLK_
PPIA	Ubiquitylation	K28	0.396		_VSFELFADK(gl)VPK_
PPIA	Ubiquitylation	K44	0.553	0.832	_ALSTGEK(gl)GFGYK_
PPIA	Ubiquitylation	K49	0.505	0.774	_GFGYK(gl)GSCFHR_
PPIA	Ubiquitylation	K82	0.354	2.128	_SIYGEK(gl)FEDENFILK_
PPIA	Ubiquitylation	K125	0.268	0.377	_TEWLDGK(gl)HVVFGK_
PPIA	Ubiquitylation	K131	0.609	-0.067	_HVVFGK(gl)VK_
PPIA	Ubiquitylation	K133	0.034	0.019	_VK(gl)EGMNIVEAMER_
PPIA	Ubiquitylation	K155	0.233		_K(gl)ITIADCGQLE_
PPIAL4D	Ubiquitylation	K28	0.396		_VSFELFADK(gl)VPK_
PPIAL4D	Ubiquitylation	K44	0.553	0.832	_ALSTGEK(gl)GFGYK_
PPIAL4D	Ubiquitylation	K49	0.505	0.774	_GFGYK(gl)GSCFHR_
PPIAL4D	Ubiquitylation	K82	0.354	2.128	_SIYGEK(gl)FEDENFILK_
PPIAL4D	Ubiquitylation	K125	0.268	0.377	_TEWLDGK(gl)HVVFGK_
PPIAL4D	Ubiquitylation	K131	0.609	-0.067	_HVVFGK(gl)VK_
PPIAL4D	Ubiquitylation	K133	0.034	0.019	_VK(gl)EGMNIVEAMER_
PPIAL4D	Ubiquitylation	K155	0.233		_K(gl)ITIADCGQLE_
PPIB	Ubiquitylation	K165	0.337		_TAWLDGK(gl)HVVFGK_
PPIB	Ubiquitylation	K195	-0.826		_DKPLK(gl)DVIIADCGK_
PPID	Ubiquitylation	K285	0.088		_LQPIALSCVLNIGACKLK(gl)_
PPIE	Ubiquitylation	K83	-0.219		_VNLAK(gl)PMR_
PPIE	Ubiquitylation	K190	-0.831		_KIESFGSK(gl)SGR_
PPIF	Ubiquitylation	K190	-0.831		_KIESFGSK(gl)SGR_
PPIG	Ubiquitylation	K158	0.674		_EIENQK(gl)TDAASKPFAEVR_
PPIG	Phosphorylation	S290		-0.173	_KS(ph)PPKADEK_
PPIG	Phosphorylation	S397	0.407	0.444	_SELNEIKENQRS(ph)PVR_
PPIG	Phosphorylation	S687	0.675	0.433	_ADRDQS(ph)PFSK_
PPIG	Phosphorylation	S690	0.649	0.330	_KADRDQSPFS(ph)K_
PPIG	Phosphorylation	S696	2.848	2.701	_IKQSS(ph)QDNELK_
PPIG	Phosphorylation	S716	1.034	0.744	_IRS(ph)SVEKENQK_
PPIG	Phosphorylation	S717	0.968	0.881	_IRSS(ph)VEKENQK_
PPIG	Phosphorylation	S744		-0.252	_KFDHES(ph)SPGTDEDKSG_
PPIG	Phosphorylation	S745		-0.563	_FDHESS(ph)PGTDEDKSG_
PPIH	Ubiquitylation	K101	-0.084	-0.652	_GPFADENFK(gl)LR_
PPIL1	Ubiquitylation	K80	-0.243		_GGASIYGK(gl)QFEDELHPDLK_
PPIL1	Phosphorylation	T147		0.597	_VGMVET(ph)NSQDRPVDDVK_
PPIL1	Phosphorylation	S149	-0.076	0.410	_VGMVETNS(ph)QDRPVDDVK_
PPIL1	Ubiquitylation	K161	0.008		_IIK(gl)AYPSG_
PPIL4	Phosphorylation	S178	-1.551	-1.342	_INHTVILDDPFDDPPDLLIPDRS(ph)PEPTR_
PPIL4	Phosphorylation	T182	-1.445	-1.147	_INHTVILDDPFDDPPDLLIPDRSPEPT(ph)R_
PPIL4	Ubiquitylation	K201	-0.741	-1.648	_IGADEEIDDFK(gl)GR_
PPIL4	Ubiquitylation	K215	-0.988		_SAEEVEEIKAEK(gl)EAK_
PPIL4	Ubiquitylation	K321	-0.031		_IHVDFSQSVAK(gl)VK_
RGPD3	Phosphorylation	S21	0.047	-0.107	_YIASVQGSTPS(ph)PR_
RGPD3	Ubiquitylation	K94		-0.527	_SVELNPTQK(gl)DLVLK_
RGPD3	Ubiquitylation	K106		0.667	_IAELLCK(gl)NDVTDGR_
RGPD3	Ubiquitylation	K776	-0.046	-0.521	_NADSEIK(gl)HSTPSPTR_
RGPD3	Phosphorylation	S788	0.362	-0.041	_YSLS(ph)PSK_
RGPD3	Phosphorylation	S796	0.553	0.575	_SYKYS(ph)PK_
RGPD3	Phosphorylation	S955	-0.786	0.030	_FESPATGILS(ph)PR_
RGPD3	Phosphorylation	S1160		-1.328	_NHETDGGS(ph)AHGDDDDDGPHFEPVVPLPDKIEVK_
RGPD3	Ubiquitylation	K1220		0.641	_GIGNVK(gl)ILR_
RGPD3	Phosphorylation	T1396	-0.510	-0.398	_ELVGPPLAETVFT(ph)PKT(ph)SPENVQDR_
RGPD3	Phosphorylation	T1399	-0.665		_ELVGPPLAETVFT(ph)PKT(ph)SPENVQDR_
RGPD3	Phosphorylation	S1400	-0.440	0.082	_ELVGPPLAETVFT(ph)PKTS(ph)PENVQDR_
RGPD3	Phosphorylation	S1456	0.018	0.508	_SGSSFVHQAS(ph)FK_
RGPD3	Phosphorylation	S1573		0.499	_CVACQNPDKPS(ph)PSTSVPAPASFK_
RGPD3	Ubiquitylation	K1963		-0.768	_STSGEGFQFGK(gl)K_
RGPD3	Ubiquitylation	K1964		-0.768	_STSGEGFQFGK(gl)K_
RGPD3	Ubiquitylation	K2061	0.441	0.872	_GLGNLK(gl)ILK_
RGPD3	Phosphorylation	S2250	1.539	-0.701	_EDALDDSVSSSSVHASPLAS(ph)SPVRK_
RGPD3	Phosphorylation	S2251	-0.023		_EDALDDSVSSSSVHASPLASS(ph)PVRK_
RGPD3	Phosphorylation	S2276	0.074	0.029	_SALS(ph)PSKSPAK_
RGPD3	Phosphorylation	S2280	0.065	0.135	_SALSPSKS(ph)PAK_
RGPD3	Phosphorylation	T2293	0.717	0.584	_LNQSGTSVGT(ph)DEESDVTQEEER_
RGPD3	Ubiquitylation	K2358	0.436	0.327	_GIGDIK(gl)ILQNYDNK_
RGPD3	Ubiquitylation	K2379	-0.664	0.332	_DQVLK(gl)LCANHR_
RGPD3	Ubiquitylation	K2396	-0.954	0.190	_ITPDMTLQNMK(gl)GTER_
RGPD3	Phosphorylation	S2454	0.335	0.393	_DSLIT(ph)PHVS(ph)R_
RGPD3	Phosphorylation	S2510	-0.171	0.107	_AVVS(ph)PPKFVFGSESVK_
RGPD3	Ubiquitylation	K2592		-0.298	_NSDIEQSSDSK(gl)VK_
RGPD3	Ubiquitylation	K2594		-0.298	_NSDIEQSSDSK(gl)VK_
RGPD3	Phosphorylation	T2613	-0.775	-0.709	_NLFASFPTEESSINYTFKT(ph)PEK_
RGPD3	Ubiquitylation	K2650	0.439		_ALATK(gl)LK_
RGPD3	Phosphorylation	Y2666		0.598	_NRPDY(ph)VSEEEEDDEDFETAVKK_
RGPD3	Phosphorylation	S2668	0.584	0.573	_NRPDYVS(ph)EEEEDDEDFETAVK_
RGPD3	Phosphorylation	S2804	0.874		_SIS(ph)SPSVSSETM(ox)DKPVDLSTR_
RGPD3	Phosphorylation	S2805	-0.018	0.448	_SISS(ph)PSVSSETMDKPVDLSTR_
RGPD3	Phosphorylation	S2900	-0.395	-0.513	_VGEDEDGS(ph)DEEVVHNEDIHFEPIVSLPEVEVK_
RGPD3	Ubiquitylation	K2935	-1.498	0.007	_SGEEDEEILFK(gl)ER_
RGPD3	Phosphorylation	S3207	0.368	0.527	_IESFGS(ph)PK_