RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
MATR3	2	0.330	-0.770	0.616	-1.792	-0.824	-0.795	-0.093
MATR3	2	0.330	-0.770	-0.059	-2.461	-1.002
SFPQ	1	-1.880	4.270	0.328	0.568	-0.141	-0.140	0.032
NONO	0	-1.510	2.340	-0.053	0.223	-0.198	-0.033	-0.027
NONO	0	-1.510	2.340

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
MATR3	Ubiquitylation	K3	-0.669	-0.130	_(ac)SK(gl)SFQQSSLSR_
MATR3	Phosphorylation	S9	1.062	1.758	_SFQQSS(ph)LSR_
MATR3	Phosphorylation	T150		1.273	_RRT(ph)EEGPTLSYGR_
MATR3	Phosphorylation	S164	-0.799	-0.754	_S(ph)ATREPPYR_
MATR3	Ubiquitylation	K181	0.418	0.703	_DDWEEK(gl)R_
MATR3	Phosphorylation	S188	0.552	0.352	_RDS(ph)FDDR_
MATR3	Phosphorylation	S195	0.999	0.590	_RDSFDDRGPS(ph)LNPVLDYDHGSR_
MATR3	Phosphorylation	S206	-0.408	2.048	_GPSLNPVLDYDHGS(ph)R_
MATR3	Phosphorylation	S208	3.082	2.840	_S(ph)QESGYYDR_
MATR3	Phosphorylation	S211		1.684	_DSFDDRGPSLNPVLDYDHGSRSQES(ph)GYYDR_
MATR3	Ubiquitylation	K491	-0.193	0.356	_FDQK(gl)QELGR_
MATR3	Ubiquitylation	K522	-1.136	-0.691	_LAEPYGK(gl)IK_
MATR3	Ubiquitylation	K524	-0.770		_LAEPYGKIK(gl)_
MATR3	Ubiquitylation	K554	-0.121	0.185	_EDAMAMVDHCLK(gl)K_
MATR3	Ubiquitylation	K555	0.016	0.639	_K(gl)ALWFQGR_
MATR3	Ubiquitylation	K565	0.765		_CVK(gl)VDLSEK_
MATR3	Ubiquitylation	K571	0.335		_VDLSEK(gl)YK_
MATR3	Ubiquitylation	K588	-0.137	0.306	_GIDLLK(gl)K_
MATR3	Ubiquitylation	K589		0.306	_GIDLLK(gl)K_
MATR3	Phosphorylation	S596	-0.031	0.457	_RS(ph)YSPDGK_
MATR3	Phosphorylation	S598	0.251	0.233	_SYS(ph)PDGKESPSDK_
MATR3	Phosphorylation	S604	1.224	1.629	_SYS(ph)PDGKES(ph)PSDK_
MATR3	Phosphorylation	T612	2.910	2.961	_T(ph)DGSQKTESSTEGKEQEEK_
MATR3	Phosphorylation	S615	2.286	2.251	_TDGS(ph)QKTESSTEGKEQEEK_
MATR3	Phosphorylation	S621	2.639	1.672	_TDGSQKTESS(ph)TEGKEQEEK_
MATR3	Phosphorylation	S814		-1.235	_NEENTEPGAESSENADDPNKDTSENADGQS(ph)DENKDDYTIPDEYR_
MATR3	Ubiquitylation	K880	1.094		_LKK(gl)FLNK_
MATR3	Ubiquitylation	K884	0.657	0.492	_FLNK(gl)LAEERR_
NONO	Ubiquitylation	K5	0.390	-0.727	_(ac)MQSNK(gl)TFNLEK_
NONO	Ubiquitylation	K11	0.290	-1.060	_TFNLEK(gl)QNHTPR_
NONO	Ubiquitylation	K68	-0.317		_KPGEK(gl)TFTQR_
NONO	Ubiquitylation	K96	0.095	-0.745	_KLFEK(gl)YGK_
NONO	Ubiquitylation	K99	0.301	-1.179	_YGK(gl)AGEVFIHK_
NONO	Ubiquitylation	K107		-1.009	_AGEVFIHK(gl)DK_
NONO	Ubiquitylation	K109	0.479	0.300	_DK(gl)GFGFIR_
NONO	Ubiquitylation	K190	-1.285	-2.164	_GRPSGK(gl)GIVEFSGKPAAR_
NONO	Ubiquitylation	K198	0.167	-0.607	_GIVEFSGK(gl)PAAR_
NONO	Ubiquitylation	K243	0.302	-1.020	_LVIK(gl)NQQFHK_
NONO	Ubiquitylation	K272	0.498		_WK(gl)ALIEMEK_
NONO	Ubiquitylation	K279	0.027	-0.480	_ALIEMEK(gl)QQQDQVDR_
NONO	Ubiquitylation	K336	0.158	-0.998	_MEELHNQEVQK(gl)R_
NONO	Ubiquitylation	K371	-0.098	-0.962	_RQQEGFK(gl)GTFPDAR_
NONO	Phosphorylation	T428		-2.034	_GAM(ox)PPAPVPAGTPAPPGPATMMPDGTLGLT(ph)PPTTER_
NONO	Phosphorylation	T450	0.010	-0.660	_FGQAATM(ox)EGIGAIGGT(ph)PPAFNR_
NONO	Ubiquitylation	K467	-0.128	-0.646	_AAPGAEFAPNK(gl)R_
SFPQ	Ubiquitylation	K271	0.191		_SEEK(gl)ISDSEGFK_
SFPQ	Phosphorylation	S273	0.863	0.625	_SEEKIS(ph)DSEGFK_
SFPQ	Ubiquitylation	K291	0.067		_RPGEK(gl)TYTQR_
SFPQ	Ubiquitylation	K330	0.013		_YGEPGEVFINK(gl)GK_
SFPQ	Ubiquitylation	K332	1.002	1.454	_GK(gl)GFGFIK_
SFPQ	Ubiquitylation	K338	0.958		_GFGFIK(gl)LESR_
SFPQ	Ubiquitylation	K413	0.957	0.529	_STGK(gl)GIVEFASKPAAR_
SFPQ	Ubiquitylation	K421	0.383	1.058	_GIVEFASK(gl)PAAR_
SFPQ	Ubiquitylation	K466	-0.093	1.182	_LAQK(gl)NPMYQK_
SFPQ	Ubiquitylation	K559	-0.148	0.186	_MEELHNQEMQK(gl)R_
SFPQ	Phosphorylation	T687		-1.833	_GMGPGT(ph)PAGYGR_