RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
RAD50	3	0.350	-0.420	0.165	0.571	0.509	0.691	0.587
MDC1	3	0.550	-0.700
NBN	2	-0.220	-0.170		0.708	0.569	-0.563	0.354
MRE11A	0	1.600	-0.730		0.145	0.420
MRE11A	0	1.600	-0.730	0.023			0.453	0.150

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
MDC1	Phosphorylation	S168	0.788	0.909	_LLLAEDS(ph)EEEVDFLSER_
MDC1	Phosphorylation	S329	-0.069	-0.749	_AQPFGFIDS(ph)DTDAEEERIPATPVVIPMK_
MDC1	Phosphorylation	T331	-0.735	-0.646	_AQPFGFIDSDT(ph)DAEEERIPATPVVIPMKK_
MDC1	Phosphorylation	S376	-0.196	-0.279	_GPGAPGLAHLQESQAGS(ph)DTDVEEGKAPQAVPLEK_
MDC1	Phosphorylation	T378	-0.401		_GPGAPGLAHLQESQAGSDT(ph)DVEEGK_
MDC1	Phosphorylation	T404		-0.050	_SQASMVINSDT(ph)DDEEEVSAALTLAHLK_
MDC1	Phosphorylation	S453	0.346		_SQTTTERDS(ph)DTDVEEEELPVENR_
MDC1	Phosphorylation	T455	-0.574		_SQTTTERDSDT(ph)DVEEEELPVENR_
MDC1	Ubiquitylation	K472	-0.332		_EAVLK(gl)DHTK_
MDC1	Ubiquitylation	K476	-0.040		_EAVLKDHTK(gl)IR_
MDC1	Phosphorylation	S485	0.170	-0.259	_AHS(ph)EKDQPPFGDSDDSVEADK_
MDC1	Phosphorylation	S513	3.827	3.443	_S(ph)QASTTVDINTQVEK_
MDC1	Phosphorylation	Y775		-0.566	_ESEDSETQPFDTHLEAY(ph)GPCLSPPR_
MDC1	Phosphorylation	S780	-0.852	-0.642	_ESEDSETQPFDTHLEAYGPCLS(ph)PPR_
MDC1	Phosphorylation	S793	-0.391	-0.332	_AIPGDQHPES(ph)PVHTEPM(ox)GIQGR_
MDC1	Phosphorylation	S986	-1.929		_GQASSPTPEPGVGAGDLPGPTSAPVPS(ph)GSQSGGRGSPVSPR_
MDC1	Phosphorylation	S995		-0.793	_GQAS(ph)SPTPEPGVGAGDLPGPTSAPVPSGSQSGGRGS(ph)PVSPR_
MDC1	Phosphorylation	S1086		1.806	_TRQDGS(ph)QEAPEAPLSSELEPFHPKPK_
MDC1	Phosphorylation	T1157		-0.188	_SSVKT(ph)PEPVVPTAPELQPSTSTDQPVTSEPTSQVTR_
MDC1	Phosphorylation	S1194	0.770		_S(ph)SVKTPETVVPTALELQPSTSTDRPVTSEPTSQATR_
MDC1	Phosphorylation	T1198	0.898		_SSVKT(ph)PETVVPTALELQPSTSTDRPVTSEPTSQATR_
MDC1	Phosphorylation	T1239		-1.231	_SSVKT(ph)PEPVVPTAPELQPSTSTDQPVTSEPTYQATR_
MDC1	Phosphorylation	T1384		-1.318	_NPESTVPIAPELPPSTSTEQPVT(ph)PEPTSR_
MDC1	Phosphorylation	S1399		-0.366	_NRS(ph)SGKTPETLVPTAPK_
MDC1	Phosphorylation	S1417		-0.579	_LEPS(ph)TSTDQPVT(ph)PEPTSQATR_
MDC1	Phosphorylation	S1419	-0.152	0.059	_LEPSTS(ph)TDQPVTPEPTSQATR_
MDC1	Phosphorylation	T1425	0.018	-0.167	_LEPSTSTDQPVT(ph)PEPTSQATR_
MDC1	Phosphorylation	T1444	-0.989		_SSVKT(ph)PETVVPTAPELQPSTSTDQPVTPEPTSQATR_
MDC1	Phosphorylation	T1466	5.092		_SSVKT(ph)PETVVPTAPELQPSTSTDQPVT(ph)PEPTSQATR_
MDC1	Phosphorylation	T1488		-0.511	_SSVKTPET(ph)VVPTAPELQASASTDQPVTSEPTSR_
MDC1	Phosphorylation	T1541		-1.076	_TPETVVPAAPELQPST(ph)STDQPVTPEPTSR_
MDC1	Phosphorylation	T1548	-1.262	-1.584	_TPETVVPAAPELQPSTSTDQPVT(ph)PEPTSR_
MDC1	Phosphorylation	T1567	0.014	0.330	_SSVKT(ph)PESIVPIAPELQPSTSR_
MDC1	Phosphorylation	T1589	-0.952	-0.451	_NQLVT(ph)PEPTSR_
MDC1	Phosphorylation	T1608	-0.490	-1.272	_SSVKT(ph)PEPVVPTAPEPHPTTSTDQPVTPK_
MDC1	Phosphorylation	T1630		-1.705	_SSVKT(ph)PEPVVPTAPEPHPTTSTDQPVT(ph)PK_
MDC1	Phosphorylation	T1671		0.063	_TPKPVEPAASDLEPFTPTDQSVT(ph)PEAIAQGGQSK_
MDC1	Phosphorylation	S1775	0.591	-0.039	_AAESLTAIPEPAS(ph)PQLLETPIHASQIQK_
MDC1	Phosphorylation	S1797	-0.582	-0.634	_S(ph)RFTPELQPK_
MDC1	Phosphorylation	T1800	-0.475	-0.235	_SRFT(ph)PELQPK_
MDC1	Phosphorylation	S1820	0.073	0.144	_SLATMDS(ph)PPHQK_
MDC1	Ubiquitylation	K1885	1.530		_TK(gl)LNQESTAPK_
MRE11A	Ubiquitylation	K387	0.442		_FSQK(gl)FVDR_
NBN	Phosphorylation	T335		-1.121	_T(ph)TTPGPSLSQGVSVDEK_
NBN	Phosphorylation	S341	3.085		_TTTPGPS(ph)LSQGVSVDEK_
NBN	Phosphorylation	S343	3.710	3.629	_TTTPGPSLS(ph)QGVSVDEK_
NBN	Phosphorylation	S397	2.719	1.458	_MLS(ph)QDAPTVK_
NBN	Phosphorylation	S432	-0.192	-0.395	_IPNYQLS(ph)PTK_
NBN	Phosphorylation	T434	-0.188	-0.683	_IPNYQLSPT(ph)KLPSINK_
NBN	Phosphorylation	S615	1.985	4.691	_IS(ph)QENEIGKK_
RAD50	Ubiquitylation	K62	-1.069		_YICTGDFPPGTK(gl)GNTFVHDPK_
RAD50	Phosphorylation	S635	2.474	3.050	_LFDVCGS(ph)QDFESDLDR_
RAD50	Ubiquitylation	K753	0.394	0.397	_NK(gl)LQNVNR_
RAD50	Ubiquitylation	K933	0.397		_FQQEKEELINKK(gl)_
RAD50	Ubiquitylation	K1068	0.098		_LEENIDNIK(gl)R_
RAD50	Ubiquitylation	K1178	-0.548		_SDADENVSASDK(gl)RR_
RAD50	Ubiquitylation	K1285	2.195		_SEYVEK(gl)FYR_